Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lygf | C5P43_12490 | Not Available | Positive | 2308356 - 2308751 | 15318.6 |
| Gp58 | C5P43_12495 | Not Available | Positive | 2308748 - 2309053 | 11393.8 |
| Hypothetical protein | C5P43_12500 | Not Available | Positive | 2309013 - 2309546 | 19172.3 |
| Hypothetical protein | C5P43_12505 | Not Available | Positive | 2309548 - 2309904 | 14105.8 |
| Putative serine/threonine phosphatase | C5P43_12510 | Not Available | Negative | 2310449 - 2311165 | 27038.2 |
| Attr | Not Available | Not Available | Positive | 2310501 - 2310512 | Not Available |
| Putative protein kinase | C5P43_12515 | Not Available | Negative | 2311149 - 2311943 | 30478.3 |
| Hypothetical protein | C5P43_12520 | Not Available | Negative | 2312004 - 2312213 | 7922.55 |
| Host cell-killing modulation protein | C5P43_12525 | Not Available | Positive | 2312298 - 2312510 | 7923.93 |
| Hypothetical protein | C5P43_12535 | Not Available | Positive | 2313009 - 2313205 | 8063.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





