Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | C5P43_07915 | Not Available | Negative | 1471796 - 1471941 | 4965.29 |
| fumarylacetoacetate hydrolase family protein | C5P43_07920 | Not Available | Positive | 1471942 - 1472477 | 18986.8 |
| ycgn family cysteine cluster protein | C5P43_07925 | Not Available | Positive | 1472554 - 1473015 | 17911.3 |
| protein umud | C5P43_07935 | Not Available | Positive | 1474505 - 1474924 | 15064.2 |
| protein umuc | C5P43_07940 | Not Available | Positive | 1474924 - 1476192 | 47682.4 |
| disulfide bond formation protein b | C5P43_07945 | Not Available | Negative | 1476238 - 1476768 | 20143.3 |
| na+/h+ antiporter nhab | C5P43_07950 | Not Available | Negative | 1476914 - 1478455 | 56731.8 |
| fatty acid metabolism transcriptional regulator fadr | C5P43_07955 | Not Available | Positive | 1478677 - 1479396 | 26970.2 |
| spovr family protein | C5P43_07960 | Not Available | Negative | 1479448 - 1480980 | 60817.1 |
| d-amino acid dehydrogenase small subunit | C5P43_07965 | Not Available | Positive | 1481310 - 1482608 | 47610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





