Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin | C5P43_10275 | Not Available | Positive | 1904784 - 1905209 | 15555.6 |
| Lysin | C5P43_10280 | Not Available | Positive | 1905197 - 1905622 | 15784.9 |
| Lysc | C5P43_10285 | Not Available | Positive | 1905594 - 1905767 | 6158.16 |
| Tail completion protein | C5P43_10290 | Not Available | Positive | 1905730 - 1906197 | 17391.8 |
| Tail completion protein | C5P43_10295 | Not Available | Positive | 1906190 - 1906642 | 17257.9 |
| Baseplate protein | C5P43_10300 | Not Available | Positive | 1906709 - 1907344 | 22189.3 |
| Baseplate wedge subunit | C5P43_10305 | Not Available | Positive | 1907341 - 1907688 | 12638.3 |
| Baseplate assembly | C5P43_10310 | Not Available | Positive | 1907693 - 1908601 | 32754.7 |
| Tail fibers protein | C5P43_10315 | Not Available | Positive | 1908594 - 1909205 | 22521.8 |
| Tail fiber protein | C5P43_10320 | Not Available | Positive | 1909202 - 1910338 | 40836.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





