Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--fructose-6-phosphate transaminase (isomerizing) | C5P43_06250 | Not Available | Negative | 1165441 - 1166787 | 49201.1 |
| is5/is1182 family transposase | C5P43_06255 | Not Available | Negative | 1166788 - 1166983 | 7564.84 |
| hypothetical protein | C5P43_06260 | Not Available | Positive | 1167564 - 1167950 | 14666.4 |
| is5/is1182 family transposase | C5P43_06270 | Not Available | Negative | 1168090 - 1169013 | 34912.0 |
| hypothetical protein | C5P43_06275 | Not Available | Negative | 1169371 - 1169670 | 10595.6 |
| hypothetical protein | C5P43_06295 | Not Available | Negative | 1172557 - 1172808 | 9049.76 |
| peptidase | C5P43_06300 | Not Available | Positive | 1172966 - 1173397 | 15934.0 |
| translesion error-prone dna polymerase v subunit umuc | C5P43_06305 | Not Available | Positive | 1173397 - 1174668 | 48018.8 |
| parb/repb/spo0j family partition protein | C5P43_06310 | Not Available | Negative | 1174750 - 1175727 | 36700.0 |
| para family protein | C5P43_06315 | Not Available | Negative | 1175724 - 1176929 | 44401.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





