Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjji family glycine radical enzyme | C5P43_05835 | Not Available | Negative | 1077106 - 1078656 | 58023.3 |
| 2-deoxyribose-5-phosphate aldolase | C5P43_05840 | Not Available | Positive | 1078914 - 1079693 | 27749.3 |
| thymidine phosphorylase | C5P43_05845 | Not Available | Positive | 1079820 - 1081142 | 47168.8 |
| phosphopentomutase | C5P43_05850 | Not Available | Positive | 1081194 - 1082417 | 44372.4 |
| purine-nucleoside phosphorylase | C5P43_05855 | Not Available | Positive | 1082497 - 1083216 | 25951.4 |
| lipoate--protein ligase a | C5P43_05860 | Not Available | Negative | 1083672 - 1084688 | 37837.8 |
| protein smp | C5P43_05865 | Not Available | Negative | 1084716 - 1085360 | 24084.2 |
| phosphoserine phosphatase | C5P43_05870 | Not Available | Positive | 1085466 - 1086434 | 35044.8 |
| dna repair protein rada | C5P43_05875 | Not Available | Positive | 1086483 - 1087865 | 49445.0 |
| trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator nadr | C5P43_05880 | Not Available | Positive | 1087886 - 1089118 | 47320.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





