Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_05325 | Not Available | Negative | 982295 - 982717 | 16065.0 |
| hypothetical protein | C5P43_05330 | Not Available | Negative | 982751 - 983143 | 14058.1 |
| thiol:disulfide interchange protein | C5P43_05335 | Not Available | Negative | 983168 - 983917 | 27096.0 |
| lytic transglycosylase | C5P43_05340 | Not Available | Positive | 984065 - 984604 | 20635.6 |
| hypothetical protein | C5P43_05345 | Not Available | Positive | 984687 - 985253 | 21509.9 |
| hnh endonuclease | C5P43_05350 | Not Available | Negative | 985361 - 986650 | 49440.2 |
| conjugal transfer protein trag | C5P43_05355 | Not Available | Negative | 986831 - 990784 | 139773.0 |
| conjugal transfer protein | C5P43_05360 | Not Available | Negative | 990793 - 992208 | 50430.4 |
| thioredoxin family protein | C5P43_05365 | Not Available | Negative | 992198 - 993244 | 39302.1 |
| hypothetical protein | C5P43_05370 | Not Available | Negative | 993838 - 994350 | 19166.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





