Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_04810 | Not Available | Positive | 887782 - 887964 | 6633.33 |
| yicc family protein | C5P43_04815 | Not Available | Positive | 887977 - 888840 | 33160.9 |
| dna damage-inducible protein d | C5P43_04820 | Not Available | Positive | 889061 - 889885 | 31163.7 |
| trimeric intracellular cation channel family protein | C5P43_04825 | Not Available | Positive | 890177 - 890794 | 22049.8 |
| dna ligase b | C5P43_04830 | Not Available | Negative | 890791 - 892473 | 63311.0 |
| guanylate kinase | C5P43_04835 | Not Available | Positive | 892731 - 893354 | 23594.1 |
| dna-directed rna polymerase subunit omega | C5P43_04840 | Not Available | Positive | 893409 - 893684 | 10237.2 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | C5P43_04845 | Not Available | Positive | 893703 - 895811 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C5P43_04850 | Not Available | Positive | 895818 - 896507 | 25344.6 |
| atp-dependent dna helicase recg | C5P43_04855 | Not Available | Positive | 896513 - 897277 | 28092.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





