Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transferase gsta | C5P43_03380 | Not Available | Positive | 639454 - 640059 | 22897.7 |
| pyridoxamine kinase | C5P43_03385 | Not Available | Negative | 640103 - 640966 | 31324.1 |
| tyrosine--trna ligase | C5P43_03390 | Not Available | Negative | 641025 - 642299 | 47529.6 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | C5P43_03395 | Not Available | Negative | 642428 - 643084 | 25560.6 |
| lysozyme inhibitor | C5P43_03400 | Not Available | Negative | 643143 - 643472 | 12495.2 |
| anhydro-n-acetylmuramic acid kinase | C5P43_03405 | Not Available | Negative | 643570 - 644679 | 39516.7 |
| outer membrane lipoprotein slyb | C5P43_03410 | Not Available | Positive | 644953 - 645420 | 15602.7 |
| slya family transcriptional regulator | C5P43_03415 | Not Available | Negative | 645467 - 645901 | 16354.0 |
| duf1656 domain-containing protein | C5P43_03420 | Not Available | Positive | 646102 - 646338 | 8891.33 |
| hlyd family secretion protein | C5P43_03425 | Not Available | Positive | 646341 - 647198 | 31568.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





