Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tube protein | C5P43_06530 | Not Available | Negative | 1219509 - 1219964 | 16273.3 |
| Tail sheath | C5P43_06535 | Not Available | Negative | 1219961 - 1221109 | 41327.4 |
| Putative tail completion protein | C5P43_06540 | Not Available | Negative | 1221129 - 1221842 | 26579.8 |
| Tail protein | C5P43_06545 | Not Available | Negative | 1221839 - 1222312 | 17823.2 |
| Head completion/stabilization protein | C5P43_06550 | Not Available | Negative | 1222322 - 1222816 | 18116.3 |
| Putative terminase endonuclease subunit | C5P43_06555 | Not Available | Negative | 1222916 - 1223626 | 27536.1 |
| Major capsid protein, p2 family | C5P43_06560 | Not Available | Negative | 1223644 - 1224657 | 37079.1 |
| Capsid-scaffolding protein | C5P43_06565 | Not Available | Negative | 1224672 - 1225568 | 33018.3 |
| Putative terminase atpase subunit | C5P43_06570 | Not Available | Positive | 1225763 - 1227550 | 68618.3 |
| Portal vertex protein | C5P43_06575 | Not Available | Positive | 1227543 - 1228577 | 38206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





