Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YH17148 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309291 bp
Thymine Count
1319867 bp
Guanine Count
1358389 bp
Cytosine Count
1330421 bp
Genome Length
5318127 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
440 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein deglycase hcha | C5P01_00510 | Not Available | Negative | 89261 - 90112 | 31222.2 |
| porin | C5P01_00520 | Not Available | Negative | 90706 - 91779 | 39729.6 |
| permease | C5P01_00525 | Not Available | Positive | 92346 - 92711 | 13838.9 |
| phosphohydrolase | C5P01_00530 | Not Available | Positive | 92751 - 93446 | 25937.8 |
| dna cytosine methyltransferase | C5P01_00535 | Not Available | Positive | 93513 - 94931 | 53509.8 |
| very short patch repair endonuclease | C5P01_00540 | Not Available | Positive | 94912 - 95382 | 18002.6 |
| drug/metabolite exporter yeda | C5P01_00545 | Not Available | Negative | 95371 - 96291 | 32196.0 |
| duf808 domain-containing protein | C5P01_00550 | Not Available | Positive | 96464 - 97381 | 32116.7 |
| duf2158 domain-containing protein | C5P01_00555 | Not Available | Positive | 97460 - 97642 | 6688.89 |
| hypothetical protein | C5P01_00560 | Not Available | Positive | 97771 - 97959 | 6733.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





