Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YH17148 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309291 bp
Thymine Count
1319867 bp
Guanine Count
1358389 bp
Cytosine Count
1330421 bp
Genome Length
5318127 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
440 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein | C5P01_25230 | Not Available | Negative | 4811397 - 4812443 | 38725.0 |
| type vi secretion system baseplate subunit tssg | C5P01_25235 | Not Available | Negative | 4812454 - 4813449 | 37422.4 |
| type vi secretion system baseplate subunit tssf | C5P01_25240 | Not Available | Negative | 4813446 - 4815329 | 70495.2 |
| type vi secretion system baseplate subunit tsse | C5P01_25245 | Not Available | Negative | 4815345 - 4815839 | 18982.6 |
| impe family protein | C5P01_25250 | Not Available | Negative | 4815836 - 4816666 | 30660.1 |
| type vi secretion system-associated protein tagk | C5P01_25255 | Not Available | Negative | 4816653 - 4817567 | 34082.7 |
| type vi secretion system atpase tssh | C5P01_25260 | Not Available | Positive | 4817900 - 4820533 | 96303.8 |
| peptidoglycan-binding domain-containing protein | C5P01_25265 | Not Available | Positive | 4820546 - 4821109 | 20047.7 |
| hypothetical protein | C5P01_25270 | Not Available | Positive | 4821112 - 4821402 | 11259.8 |
| type vi secretion system contractile sheath small subunit | C5P01_25275 | Not Available | Positive | 4821464 - 4822009 | 19895.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





