Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YH17148 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309291 bp
Thymine Count
1319867 bp
Guanine Count
1358389 bp
Cytosine Count
1330421 bp
Genome Length
5318127 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
440 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reactive intermediate/imine deaminase | C5P01_19245 | Not Available | Positive | 3718884 - 3719273 | 14008.0 |
| l-serine ammonia-lyase | C5P01_19250 | Not Available | Positive | 3719345 - 3720709 | 48466.5 |
| transporter | C5P01_19260 | Not Available | Positive | 3720984 - 3722315 | 48317.6 |
| serine dehydratase subunit alpha family protein | C5P01_19265 | Not Available | Positive | 3722343 - 3723653 | 45362.8 |
| hypothetical protein | C5P01_19270 | Not Available | Negative | 3723787 - 3723951 | 5961.16 |
| pirin family protein | C5P01_19275 | Not Available | Negative | 3723974 - 3724675 | 25964.0 |
| duf805 domain-containing protein | C5P01_19290 | Not Available | Negative | 3725727 - 3726083 | 13313.5 |
| is1 family transposase | C5P01_19295 | Not Available | Negative | 3726144 - 3726234 | 3398.12 |
| phage tail protein | C5P01_19300 | Not Available | Positive | 3726253 - 3727434 | 40933.1 |
| tail fiber assembly protein | C5P01_19305 | Not Available | Positive | 3727434 - 3728018 | 21663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





