Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YH17148 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309291 bp
Thymine Count
1319867 bp
Guanine Count
1358389 bp
Cytosine Count
1330421 bp
Genome Length
5318127 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
440 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfcl family protein | C5P01_06915 | Not Available | Positive | 1302343 - 1302621 | 10000.6 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C5P01_06920 | Not Available | Negative | 1302742 - 1304748 | 74438.1 |
| 3-oxoacyl-acp synthase i | C5P01_06925 | Not Available | Positive | 1304907 - 1306127 | 42615.9 |
| hypothetical protein | C5P01_06930 | Not Available | Negative | 1306266 - 1306487 | 8565.37 |
| mfs transporter | C5P01_06935 | Not Available | Positive | 1306429 - 1307607 | 40517.8 |
| flagella biosynthesis regulator flk | C5P01_06940 | Not Available | Negative | 1307604 - 1308599 | 36626.4 |
| erythronate-4-phosphate dehydrogenase | C5P01_06945 | Not Available | Positive | 1308698 - 1309834 | 41307.9 |
| aspartate-semialdehyde dehydrogenase | C5P01_06950 | Not Available | Positive | 1309900 - 1310913 | 36285.0 |
| trna pseudouridine(38-40) synthase trua | C5P01_06955 | Not Available | Positive | 1310913 - 1311725 | 30386.2 |
| deda family protein | C5P01_06960 | Not Available | Positive | 1311808 - 1312467 | 24662.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





