Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YH17148 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309291 bp
Thymine Count
1319867 bp
Guanine Count
1358389 bp
Cytosine Count
1330421 bp
Genome Length
5318127 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
440 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C5P01_04550 | Not Available | Positive | 835213 - 835473 | 9430.85 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | C5P01_04555 | Not Available | Positive | 835475 - 836242 | 28183.9 |
| flagellar biosynthesis protein flhb | C5P01_04560 | Not Available | Positive | 836251 - 836982 | 28473.6 |
| flhb hrpn yscu spas family protein | C5P01_04565 | Not Available | Positive | 837009 - 837371 | 13822.5 |
| invasion protein | C5P01_04570 | Not Available | Negative | 837432 - 837725 | 11103.2 |
| luxr family transcriptional regulator | C5P01_04575 | Not Available | Negative | 837727 - 838227 | 19143.0 |
| prgh/eprh family type iii secretion apparatus protein | C5P01_04580 | Not Available | Positive | 838476 - 839666 | 45666.3 |
| type iii secretion protein | C5P01_04590 | Not Available | Positive | 840011 - 840226 | 8151.58 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C5P01_04595 | Not Available | Positive | 840267 - 841001 | 27576.6 |
| type iii secretion apparatus protein orga/mxik | C5P01_04600 | Not Available | Positive | 841017 - 841598 | 22808.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





