Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YH17148 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309291 bp
Thymine Count
1319867 bp
Guanine Count
1358389 bp
Cytosine Count
1330421 bp
Genome Length
5318127 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
440 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| knotted carbamoyltransferase ygew | C5P01_04450 | Not Available | Negative | 816737 - 817927 | 44172.9 |
| sigma-54-dependent fis family transcriptional regulator | C5P01_04455 | Not Available | Positive | 818403 - 820181 | 66085.0 |
| xanthine dehydrogenase | C5P01_04460 | Not Available | Negative | 820221 - 820700 | 16850.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | C5P01_04465 | Not Available | Negative | 820697 - 821575 | 31548.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | C5P01_04470 | Not Available | Negative | 821586 - 823883 | 82663.0 |
| formate dehydrogenase | C5P01_04475 | Not Available | Positive | 824110 - 824301 | 7420.67 |
| lipoprotein | C5P01_04480 | Not Available | Positive | 824298 - 825053 | 26540.0 |
| Trna-gly | Not Available | Not Available | Positive | 825132 - 825205 | Not Available |
| integrase | C5P01_04490 | Not Available | Positive | 825340 - 826947 | 60132.7 |
| duf4145 domain-containing protein | C5P01_04495 | Not Available | Positive | 826940 - 827599 | 24680.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





