Ectopseudomonas oleovorans strain YKJ

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Ectopseudomonas oleovorans strain YKJ is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph and an aerobe. This organism exhibits mobility, facilitated by the presence of flagella. It thrives optimally at a temperature of 30°C and falls within the mesophilic temperature range. Ectopseudomonas oleovorans strain YKJ is nonsporulating, which indicates that it does not form spores as a survival mechanism under adverse conditions. The strain has been identified in multiple habitats, suggesting its ecological versatility. Ectopseudomonas oleovorans has been noted to interact with hosts such as Homo sapiens and various Metazoa, indicating its potential relevance in both human health and broader ecological systems. Notably, it has been associated with health effects, specifically sepsis, which underscores the importance of understanding its pathogenic potential. With a single replicon, Ectopseudomonas oleovorans strain YKJ presents a simplified genomic structure that may contribute to its adaptability in diverse environments. The strain's ability to utilize organic compounds as an energy source can play a role in nutrient cycling within its habitats. Overall, understanding the characteristics and behaviors of Ectopseudomonas oleovorans strain YKJ can provide insights into its ecological roles, particularly in relation to human health and its interactions with various biological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas oleovorans
Strainstrain YKJ

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Ectopseudomonas oleovorans strain YKJ
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Ectopseudomonas oleovorans strain YKJ

Gene Summary

Adenine Count

903419 bp

Thymine Count

924286 bp

Guanine Count

1540307 bp

Cytosine Count

1508093 bp

Genome Length

4876105 bp

Protein-coding Genes

4321 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytosine(1402)-n(4))-methyltransferaseC5L43_08560Not AvailablePositive1762570 - 176351134269.2
cell division protein ftslC5L43_08565Not AvailablePositive1763508 - 176380111045.6
penicillin-binding protein 2C5L43_08570Not AvailablePositive1763798 - 176552562113.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseC5L43_08575Not AvailablePositive1765525 - 176698851661.1
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseC5L43_08580Not AvailablePositive1766981 - 176835147311.0
phospho-n-acetylmuramoyl-pentapeptide- transferaseC5L43_08585Not AvailablePositive1768352 - 176943439398.5
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseC5L43_08590Not AvailablePositive1769441 - 177079047577.3
putative lipid ii flippase ftswC5L43_08595Not AvailablePositive1770784 - 177200444527.4
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseC5L43_08600Not AvailablePositive1771994 - 177306438182.8
udp-n-acetylmuramate--l-alanine ligaseC5L43_08605Not AvailablePositive1773057 - 177449951737.4

Displaying genes 1581 – 1590 of 4377 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
SepsisCausesPMC10383778

Displaying health effects 1 – 1 of 1 in total