Apibacter adventoris strain wkB301

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Apibacter

Description

Apibacter adventoris strain wkB301 is a Gram-negative, microaerophilic bacterium characterized by its rod shape and non-motile nature. This strain has an optimal growth temperature of 32°C and falls within the mesophilic temperature range, indicating that it thrives in moderate temperature environments conducive to microbial life. The strain possesses a single replicon, suggesting a simplified genomic organization that may contribute to its adaptability and efficiency in its ecological niche. The accession number for this strain is PSZM00000000.1, which allows for easy reference and access to its genetic information in scientific databases. The microaerophilic requirement indicates that Apibacter adventoris strain wkB301 may occupy ecological niches where oxygen levels are limited but not entirely absent, such as in certain soil environments or within the guts of insects. This adaptation could be significant for its survival and functionality within these ecosystems, as microaerophiles can play essential roles in nutrient cycling and maintaining microbial diversity. Overall, the specific traits of strain wkB301 highlight its potential importance in ecological contexts, particularly in environments where oxygen is present at reduced levels.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusApibacter
SpeciesApibacter adventoris
Strainstrain wkB301

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Apibacter adventoris strain wkB301 ctg7180000001120, whole genome

Gene Summary

Adenine Count

979406 bp

Thymine Count

973695 bp

Guanine Count

405291 bp

Cytosine Count

397853 bp

Genome Length

2756245 bp

Protein-coding Genes

2443 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbonic anhydraseC4S77_12210Not AvailableNegative2645304 - 264595424326.8
hypothetical proteinC4S77_12215Not AvailableNegative2645986 - 264759358496.4
amp-dependent synthetaseC4S77_12220Not AvailableNegative2647989 - 264899038459.4
o-succinylbenzoate synthaseC4S77_12225Not AvailableNegative2649079 - 265009538714.1
hypothetical proteinC4S77_12230Not AvailableNegative2650157 - 265081024355.9
trna lysidine(34) synthetase tilsC4S77_12235Not AvailablePositive2651522 - 265282650279.2
yihy/virulence factor brkb family proteinC4S77_12240Not AvailablePositive2653459 - 265477550582.8
protein-disulfide reductaseC4S77_12245Not AvailablePositive2654924 - 265696977463.9
nad-dependent protein deacylaseC4S77_12250Not AvailablePositive2657076 - 265775925732.8
glucose-1-phosphate thymidylyltransferaseC4S77_12255Not AvailablePositive2657997 - 265916043800.2

Displaying genes 2381 – 2390 of 2492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.