Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Apibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Apibacter |
| Species | Apibacter adventoris |
| Strain | strain wkB301 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979406 bp
Thymine Count
973695 bp
Guanine Count
405291 bp
Cytosine Count
397853 bp
Genome Length
2756245 bp
Protein-coding Genes
2443 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | C4S77_05505 | Not Available | Negative | 1145122 - 1145856 | 27570.2 |
| diaminopimelate epimerase | C4S77_05510 | Not Available | Positive | 1145969 - 1146757 | 29708.2 |
| endolytic transglycosylase mltg | C4S77_05515 | Not Available | Positive | 1146754 - 1147776 | 39994.6 |
| rrna pseudouridine synthase | C4S77_05520 | Not Available | Negative | 1147796 - 1148689 | 34315.6 |
| prenyltransferase | C4S77_05525 | Not Available | Negative | 1148875 - 1149771 | 35427.0 |
| mevalonate kinase | C4S77_05530 | Not Available | Negative | 1149822 - 1150748 | 35047.7 |
| chaperonin groel | C4S77_05535 | Not Available | Negative | 1150992 - 1152620 | 57274.9 |
| co-chaperone groes | C4S77_05540 | Not Available | Negative | 1152651 - 1152929 | 9860.08 |
| hypothetical protein | C4S77_05545 | Not Available | Negative | 1153286 - 1153852 | 21172.9 |
| rna polymerase subunit sigma-24 | C4S77_05550 | Not Available | Positive | 1154025 - 1154594 | 22207.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
