Apibacter adventoris strain wkB301

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Apibacter

Description

Apibacter adventoris strain wkB301 is a Gram-negative, microaerophilic bacterium characterized by its rod shape and non-motile nature. This strain has an optimal growth temperature of 32°C and falls within the mesophilic temperature range, indicating that it thrives in moderate temperature environments conducive to microbial life. The strain possesses a single replicon, suggesting a simplified genomic organization that may contribute to its adaptability and efficiency in its ecological niche. The accession number for this strain is PSZM00000000.1, which allows for easy reference and access to its genetic information in scientific databases. The microaerophilic requirement indicates that Apibacter adventoris strain wkB301 may occupy ecological niches where oxygen levels are limited but not entirely absent, such as in certain soil environments or within the guts of insects. This adaptation could be significant for its survival and functionality within these ecosystems, as microaerophiles can play essential roles in nutrient cycling and maintaining microbial diversity. Overall, the specific traits of strain wkB301 highlight its potential importance in ecological contexts, particularly in environments where oxygen is present at reduced levels.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusApibacter
SpeciesApibacter adventoris
Strainstrain wkB301

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Apibacter adventoris strain wkB301 ctg7180000001120, whole genome

Gene Summary

Adenine Count

979406 bp

Thymine Count

973695 bp

Guanine Count

405291 bp

Cytosine Count

397853 bp

Genome Length

2756245 bp

Protein-coding Genes

2443 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseC4S77_05505Not AvailableNegative1145122 - 114585627570.2
diaminopimelate epimeraseC4S77_05510Not AvailablePositive1145969 - 114675729708.2
endolytic transglycosylase mltgC4S77_05515Not AvailablePositive1146754 - 114777639994.6
rrna pseudouridine synthaseC4S77_05520Not AvailableNegative1147796 - 114868934315.6
prenyltransferaseC4S77_05525Not AvailableNegative1148875 - 114977135427.0
mevalonate kinaseC4S77_05530Not AvailableNegative1149822 - 115074835047.7
chaperonin groelC4S77_05535Not AvailableNegative1150992 - 115262057274.9
co-chaperone groesC4S77_05540Not AvailableNegative1152651 - 11529299860.08
hypothetical proteinC4S77_05545Not AvailableNegative1153286 - 115385221172.9
rna polymerase subunit sigma-24C4S77_05550Not AvailablePositive1154025 - 115459422207.8

Displaying genes 1061 – 1070 of 2492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.