Apibacter adventoris strain wkB301

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Apibacter

Description

Apibacter adventoris strain wkB301 is a Gram-negative, microaerophilic bacterium characterized by its rod shape and non-motile nature. This strain has an optimal growth temperature of 32°C and falls within the mesophilic temperature range, indicating that it thrives in moderate temperature environments conducive to microbial life. The strain possesses a single replicon, suggesting a simplified genomic organization that may contribute to its adaptability and efficiency in its ecological niche. The accession number for this strain is PSZM00000000.1, which allows for easy reference and access to its genetic information in scientific databases. The microaerophilic requirement indicates that Apibacter adventoris strain wkB301 may occupy ecological niches where oxygen levels are limited but not entirely absent, such as in certain soil environments or within the guts of insects. This adaptation could be significant for its survival and functionality within these ecosystems, as microaerophiles can play essential roles in nutrient cycling and maintaining microbial diversity. Overall, the specific traits of strain wkB301 highlight its potential importance in ecological contexts, particularly in environments where oxygen is present at reduced levels.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusApibacter
SpeciesApibacter adventoris
Strainstrain wkB301

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Apibacter adventoris strain wkB301 ctg7180000001120, whole genome

Gene Summary

Adenine Count

979406 bp

Thymine Count

973695 bp

Guanine Count

405291 bp

Cytosine Count

397853 bp

Genome Length

2756245 bp

Protein-coding Genes

2443 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family transcriptional regulatorC4S77_05355Not AvailablePositive1113614 - 111461537706.9
carbohydrate kinaseC4S77_05360Not AvailablePositive1114645 - 111555033873.5
fumarate hydrataseC4S77_05365Not AvailableNegative1115636 - 111727660254.9
glutamine synthetase type iiiC4S77_05370Not AvailableNegative1117444 - 111963682794.4
yfce family phosphodiesteraseC4S77_05375Not AvailableNegative1120010 - 112050418969.2
trna pseudouridine(38-40) synthase truaC4S77_05380Not AvailablePositive1120532 - 112128129463.0
antibiotic abc transporter atp-binding proteinC4S77_05385Not AvailablePositive1121295 - 112304966476.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseC4S77_05390Not AvailablePositive1123173 - 112399129439.7
hypothetical proteinC4S77_05395Not AvailablePositive1124012 - 112509442020.6
duf423 domain-containing proteinC4S77_05400Not AvailableNegative1125068 - 112545114370.1

Displaying genes 1031 – 1040 of 2492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.