Apibacter sp. wkB309

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Apibacter

Description

Apibacter sp. wkB309 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic organization that may influence its replication and adaptability. This species is documented under the accession number PSZL00000000.1, which provides a reference point for further study and genetic analysis. The Gram-negative classification of Apibacter sp. wkB309 suggests that it possesses an outer membrane, which could contribute to its resilience in various environments. This structural feature is significant, as it can affect the bacterium's interactions with other microorganisms and its surroundings. Given its rod shape and single replicon, Apibacter sp. wkB309 may have specific ecological roles, potentially including nutrient cycling or interactions with other microbial communities. The simplicity of having a single replicon could enable more efficient regulation of gene expression and replication processes, which may provide advantages in specific habitats. Overall, the traits of Apibacter sp. wkB309 suggest it could be a specialized organism within its ecological niche, with potential implications for broader ecological interactions and functions. Further research could elucidate its role in microbial ecosystems, contribute to our understanding of microbial diversity, and inform potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusApibacter
SpeciesApibacter sp. wkB309
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Apibacter sp. wkB309 wkB309_combined_R1__paired__contig_3, whole

Gene Summary

Adenine Count

784455 bp

Thymine Count

803709 bp

Guanine Count

344750 bp

Cytosine Count

356169 bp

Genome Length

2289083 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC4S75_08480Not AvailablePositive1951682 - 195212216256.7
thiamine-phosphate kinaseC4S75_08485Not AvailablePositive1952659 - 195371438773.3
30s ribosomal protein s16C4S75_08490Not AvailablePositive1953821 - 195437820330.1
16s rrna processing protein rimmC4S75_08495Not AvailablePositive1954387 - 195490519978.0
acetyl-coa carboxylase carboxyl transferase subunit alphaC4S75_08500Not AvailablePositive1955014 - 195596735787.0
metal-dependent phosphohydrolaseC4S75_08505Not AvailablePositive1956178 - 195682524657.3
adenylosuccinate lyaseC4S75_08510Not AvailableNegative1956990 - 195841754567.9
sensor histidine kinaseC4S75_08515Not AvailableNegative1958683 - 196004752818.7
dna-binding response regulatorC4S75_08520Not AvailableNegative1960056 - 196073626132.9
cusa/czca family heavy metal efflux rnd transporterC4S75_08525Not AvailableNegative1960768 - 1963866114902.0

Displaying genes 1651 – 1660 of 1942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.