Apibacter sp. wkB309

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Apibacter

Description

Apibacter sp. wkB309 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic organization that may influence its replication and adaptability. This species is documented under the accession number PSZL00000000.1, which provides a reference point for further study and genetic analysis. The Gram-negative classification of Apibacter sp. wkB309 suggests that it possesses an outer membrane, which could contribute to its resilience in various environments. This structural feature is significant, as it can affect the bacterium's interactions with other microorganisms and its surroundings. Given its rod shape and single replicon, Apibacter sp. wkB309 may have specific ecological roles, potentially including nutrient cycling or interactions with other microbial communities. The simplicity of having a single replicon could enable more efficient regulation of gene expression and replication processes, which may provide advantages in specific habitats. Overall, the traits of Apibacter sp. wkB309 suggest it could be a specialized organism within its ecological niche, with potential implications for broader ecological interactions and functions. Further research could elucidate its role in microbial ecosystems, contribute to our understanding of microbial diversity, and inform potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusApibacter
SpeciesApibacter sp. wkB309
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Apibacter sp. wkB309 wkB309_combined_R1__paired__contig_3, whole

Gene Summary

Adenine Count

784455 bp

Thymine Count

803709 bp

Guanine Count

344750 bp

Cytosine Count

356169 bp

Genome Length

2289083 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional molybdenum cofactor biosynthesis protein moac/moabC4S75_05985Not AvailablePositive1400267 - 140117533196.5
molybdate abc transporter substrate-binding proteinC4S75_05990Not AvailablePositive1401191 - 140195528097.9
molybdate abc transporter permease subunitC4S75_05995Not AvailablePositive1401960 - 140263724884.2
molybdenum abc transporter atp-binding proteinC4S75_06000Not AvailablePositive1402646 - 140330224570.9
hypothetical proteinC4S75_06005Not AvailablePositive1403451 - 14036638571.08
nucleotide excision repair endonucleaseC4S75_06010Not AvailableNegative1403813 - 140459530609.1
sos mutagenesis and repair protein umucC4S75_06015Not AvailableNegative1404650 - 140591248290.9
peptidase s24C4S75_06020Not AvailableNegative1405914 - 140633015850.2
response regulatorC4S75_06025Not AvailableNegative1406610 - 140726324893.8
lipoprotein signal peptideC4S75_06030Not AvailableNegative1407566 - 140862439917.5

Displaying genes 1161 – 1170 of 1942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.