Aeromonas salmonicida strain A308

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas salmonicida strain A308 is a Gram-negative, rod-shaped bacterium primarily found in aquatic habitats. It is characterized as a heterotroph, deriving its energy from organic compounds. This strain is a facultative anaerobe, meaning it can grow in both the presence and absence of oxygen, which allows it to thrive in various aquatic environments. The bacterium possesses flagella, granting it mobility, which may facilitate its movement through water and interaction with potential hosts. A308 is mesophilic, indicating that it optimally grows at moderate temperatures, typical of many aquatic environments. It has a relatively simple genomic structure, with one replicon, and is encapsulated by two membranes, characteristic of Gram-negative bacteria. A. salmonicida strain A308 is known to free-living in the environment and has specific hosts, including Oncorhynchus mykiss (rainbow trout), Scophthalmus maximus (flatfish), and Anguilla japonica (Japanese eel). This highlights its role in aquatic ecosystems as a pathogen that can affect fish health, particularly in aquaculture settings. Understanding the ecological dynamics of A. salmonicida strain A308 is crucial, as its interactions with aquatic hosts may influence fish populations and the overall health of aquatic ecosystems. Its ability to thrive in varying oxygen levels and its mobility suggest that it could adapt to different ecological niches, potentially impacting both wild and farmed fish species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas salmonicida
Strainstrain A308

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Aeromonas salmonicida strain A308
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Oncorhynchus mykiss, Scophthalmus maximus, Anguilla japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Aeromonas salmonicida strain A308 scaffold_109, whole genome

Gene Summary

Adenine Count

1050944 bp

Thymine Count

1028047 bp

Guanine Count

1429450 bp

Cytosine Count

1465929 bp

Genome Length

4974499 bp

Protein-coding Genes

4413 genes

Non-Coding Genes

238 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubiquitin--protein ligaseC5B77_16490Not AvailableNegative3469255 - 34694888501.23
ribosome biogenesis gtpase derC5B77_16495Not AvailableNegative3469593 - 347109255594.7
outer membrane protein assembly factor bambC5B77_16500Not AvailableNegative3471167 - 347235142449.3
hypothetical proteinC5B77_16505Not AvailableNegative3472344 - 347299423066.9
histidine--trna ligaseC5B77_16510Not AvailableNegative3472998 - 347427547863.5
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseC5B77_16515Not AvailableNegative3474414 - 347552940421.0
cytoskeleton protein rodzC5B77_16520Not AvailableNegative3475540 - 347649033788.8
type iv pilus biogenesis/stability protein pilwC5B77_16525Not AvailableNegative3476480 - 347727129723.9
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnC5B77_16530Not AvailableNegative3477284 - 347838741114.9
nucleoside-diphosphate kinaseC5B77_16535Not AvailableNegative3478557 - 347898515430.4

Displaying genes 3261 – 3270 of 4651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.