Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. RFBB5 |
| Strain | RFBB5_2119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597812 bp
Thymine Count
599336 bp
Guanine Count
1292327 bp
Cytosine Count
1284950 bp
Genome Length
3774425 bp
Protein-coding Genes
3391 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | C5B97_16645 | Not Available | Positive | 3561153 - 3561866 | 24417.8 |
| alpha/beta hydrolase | C5B97_16650 | Not Available | Negative | 3561957 - 3562817 | 31600.7 |
| nadph:quinone oxidoreductase | C5B97_16655 | Not Available | Negative | 3562864 - 3563859 | 35018.3 |
| hypothetical protein | C5B97_16660 | Not Available | Negative | 3563998 - 3564360 | 11895.2 |
| hypothetical protein | C5B97_16665 | Not Available | Negative | 3564449 - 3565138 | 25406.1 |
| hypothetical protein | C5B97_16670 | Not Available | Negative | 3565162 - 3565554 | 14248.7 |
| short chain dehydrogenase | C5B97_16675 | Not Available | Positive | 3565768 - 3566703 | 33190.7 |
| hypothetical protein | C5B97_16680 | Not Available | Positive | 3566713 - 3567558 | 31112.9 |
| aldolase | C5B97_16685 | Not Available | Negative | 3567592 - 3568242 | 22656.0 |
| hrp-dependent type iii effector protein | C5B97_16690 | Not Available | Negative | 3568239 - 3569495 | 43806.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
