Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. RFBB5 |
| Strain | RFBB5_2119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597812 bp
Thymine Count
599336 bp
Guanine Count
1292327 bp
Cytosine Count
1284950 bp
Genome Length
3774425 bp
Protein-coding Genes
3391 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | C5B97_16180 | Not Available | Positive | 3471279 - 3471734 | 16478.2 |
| 3-oxoacyl-acp reductase | C5B97_16190 | Not Available | Negative | 3472107 - 3472841 | 24296.2 |
| acetyl-coa c-acyltransferase | C5B97_16195 | Not Available | Negative | 3473197 - 3474402 | 41279.3 |
| succinyl-coa--3-ketoacid-coa transferase | C5B97_16200 | Not Available | Negative | 3474408 - 3475064 | 22598.3 |
| succinyl-coa--3-ketoacid-coa transferase | C5B97_16205 | Not Available | Negative | 3475064 - 3475882 | 28558.8 |
| 4-carboxymuconolactone decarboxylase | C5B97_16210 | Not Available | Negative | 3475875 - 3477122 | 43241.9 |
| hypothetical protein | C5B97_16215 | Not Available | Negative | 3477119 - 3478351 | 41796.8 |
| protocatechuate 3,4-dioxygenase subunit alpha | C5B97_16220 | Not Available | Negative | 3478348 - 3478929 | 20945.4 |
| protocatechuate 3,4-dioxygenase subunit beta | C5B97_16225 | Not Available | Negative | 3478922 - 3479725 | 29978.9 |
| 4-hydroxybenzoate 3-monooxygenase | C5B97_16230 | Not Available | Negative | 3479722 - 3480975 | 45766.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
