Pseudoclavibacter sp. RFBB5 RFBB5_2119

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. RFBB5, identified by the accession number PSTZ00000000.1, is characterized by having a single replicon. This trait indicates a streamlined genomic organization, which can be advantageous for certain ecological niches or metabolic pathways. The presence of only one replicon might suggest a more stable genetic structure, potentially allowing for efficient replication and maintenance of its genomic integrity. The unique characteristics of Pseudoclavibacter sp. RFBB5 may position it within specific ecological roles, such as in soil or plant-associated environments, where such streamlined genomic features could facilitate adaptation to fluctuating conditions. The organism's single replicon could also imply a reduced metabolic burden, allowing it to thrive in environments with limited resources. Understanding the genomic structure of Pseudoclavibacter sp. RFBB5 contributes to our knowledge of microbial diversity and adaptability, particularly in the context of environmental microbiology. The analysis of its genomic traits may provide insights into its ecological interactions and potential applications in biotechnology or agriculture, especially if it possesses beneficial traits related to plant growth or soil health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. RFBB5
StrainRFBB5_2119

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. RFBB5 RFBB5_2119, whole genome shotgun

Gene Summary

Adenine Count

597812 bp

Thymine Count

599336 bp

Guanine Count

1292327 bp

Cytosine Count

1284950 bp

Genome Length

3774425 bp

Protein-coding Genes

3391 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l24C5B97_14355Not AvailableNegative3069040 - 306950716701.1
50s ribosomal protein l14C5B97_14360Not AvailableNegative3069511 - 306987913259.3
30s ribosomal protein s17C5B97_14365Not AvailableNegative3069919 - 307021511192.4
50s ribosomal protein l29C5B97_14370Not AvailableNegative3070215 - 307054412321.7
50s ribosomal protein l16C5B97_14375Not AvailableNegative3070547 - 307096315411.8
30s ribosomal protein s3C5B97_14380Not AvailableNegative3070966 - 307172428641.2
50s ribosomal protein l22C5B97_14385Not AvailableNegative3071724 - 307210714084.1
30s ribosomal protein s19C5B97_14390Not AvailableNegative3072132 - 307241310717.1
50s ribosomal protein l2C5B97_14395Not AvailableNegative3072425 - 307326430502.8
50s ribosomal protein l23C5B97_14400Not AvailableNegative3073290 - 307358911164.4

Displaying genes 2841 – 2850 of 3488 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.