Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. RFBB5 |
| Strain | RFBB5_2119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597812 bp
Thymine Count
599336 bp
Guanine Count
1292327 bp
Cytosine Count
1284950 bp
Genome Length
3774425 bp
Protein-coding Genes
3391 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | C5B97_11485 | Not Available | Negative | 2478603 - 2480027 | 49234.2 |
| hypothetical protein | C5B97_11495 | Not Available | Negative | 2481345 - 2482076 | 25484.3 |
| arginine--trna ligase | C5B97_11500 | Not Available | Negative | 2482156 - 2483820 | 59786.4 |
| transglutaminase | C5B97_11505 | Not Available | Negative | 2483878 - 2484672 | 29270.8 |
| Trna-arg | Not Available | Not Available | Positive | 2484800 - 2484872 | Not Available |
| zinc ribbon domain-containing protein | C5B97_11515 | Not Available | Positive | 2484880 - 2485320 | 15462.2 |
| formamidase | C5B97_11520 | Not Available | Positive | 2485356 - 2486609 | 44966.0 |
| short-chain dehydrogenase | C5B97_11525 | Not Available | Positive | 2486737 - 2488200 | 52515.6 |
| nadph-dependent ferric siderophore reductase | C5B97_11530 | Not Available | Negative | 2488300 - 2489130 | 30288.7 |
| hypothetical protein | C5B97_11535 | Not Available | Negative | 2489208 - 2489531 | 12132.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
