Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. RFBB5 |
| Strain | RFBB5_2119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597812 bp
Thymine Count
599336 bp
Guanine Count
1292327 bp
Cytosine Count
1284950 bp
Genome Length
3774425 bp
Protein-coding Genes
3391 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cof-type had-iib family hydrolase | C5B97_10270 | Not Available | Negative | 2217360 - 2218247 | 31824.7 |
| hypothetical protein | C5B97_10275 | Not Available | Positive | 2218386 - 2219204 | 28999.2 |
| riboflavin biosynthesis protein ribd | C5B97_10280 | Not Available | Positive | 2219277 - 2219861 | 21219.2 |
| 3-dehydroquinate synthase | C5B97_10285 | Not Available | Negative | 2219858 - 2220940 | 38692.9 |
| shikimate kinase | C5B97_10290 | Not Available | Negative | 2220933 - 2221448 | 18642.1 |
| chorismate synthase | C5B97_10295 | Not Available | Negative | 2221445 - 2222716 | 44806.6 |
| shikimate dehydrogenase | C5B97_10300 | Not Available | Negative | 2222721 - 2223602 | 31041.9 |
| endolytic transglycosylase mltg | C5B97_10305 | Not Available | Negative | 2223595 - 2224857 | 44992.5 |
| holliday junction resolvase ruvx | C5B97_10310 | Not Available | Negative | 2224793 - 2225299 | 17726.1 |
| alanine--trna ligase | C5B97_10315 | Not Available | Negative | 2225292 - 2227961 | 95403.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
