Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. RFBB5 |
| Strain | RFBB5_2119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597812 bp
Thymine Count
599336 bp
Guanine Count
1292327 bp
Cytosine Count
1284950 bp
Genome Length
3774425 bp
Protein-coding Genes
3391 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | C5B97_08515 | Not Available | Negative | 1834676 - 1835704 | 35776.6 |
| peptide abc transporter substrate-binding protein | C5B97_08520 | Not Available | Positive | 1835981 - 1837600 | 57241.4 |
| abc transporter permease | C5B97_08525 | Not Available | Positive | 1837635 - 1838681 | 37115.1 |
| abc transporter permease | C5B97_08530 | Not Available | Positive | 1838674 - 1839714 | 37263.1 |
| permease | C5B97_08535 | Not Available | Positive | 1839785 - 1840513 | 24866.4 |
| hydroxyacid dehydrogenase | C5B97_08540 | Not Available | Negative | 1840733 - 1841707 | 34421.3 |
| glucarate dehydratase | C5B97_08545 | Not Available | Negative | 1841771 - 1843129 | 47543.0 |
| 5-dehydro-4-deoxyglucarate dehydratase | C5B97_08550 | Not Available | Negative | 1843227 - 1844186 | 33881.4 |
| lysr family transcriptional regulator | C5B97_08555 | Not Available | Positive | 1844334 - 1845233 | 32438.3 |
| glucarate dehydratase | C5B97_08560 | Not Available | Positive | 1845383 - 1846711 | 47959.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
