Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecoli_len:881774 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1271237 bp
Thymine Count
1274025 bp
Guanine Count
1195087 bp
Cytosine Count
1164560 bp
Genome Length
4904909 bp
Protein-coding Genes
4639 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine-5'-phosphate glycosidase | C4J69_21585 | Not Available | Positive | 4287086 - 4288024 | 32911.8 |
| nupc/nupg family nucleoside cnt transporter | C4J69_21590 | Not Available | Positive | 4288118 - 4289368 | 43434.4 |
| transcriptional regulator yeil | C4J69_21595 | Not Available | Negative | 4289439 - 4290137 | 26888.7 |
| pyrimidine-specific ribonucleoside hydrolase rihb | C4J69_21600 | Not Available | Positive | 4290267 - 4291208 | 33750.1 |
| nucleoside permease nupx | C4J69_21605 | Not Available | Positive | 4291308 - 4292558 | 43412.3 |
| kinase | C4J69_21610 | Not Available | Negative | 4292665 - 4293753 | 39712.6 |
| endonuclease iv with intrinsic 3''-5'' exonuclease activity | C4J69_21615 | Not Available | Negative | 4293756 - 4294613 | 31481.2 |
| yeih family putative sulfate export transporter | C4J69_21620 | Not Available | Negative | 4294687 - 4295736 | 36884.3 |
| lysr family transcriptional regulator | C4J69_21625 | Not Available | Positive | 4295835 - 4296716 | 32725.7 |
| hypothetical protein | C4J69_21630 | Not Available | Positive | 4296755 - 4296937 | 7206.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





