Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecoli_len:881774 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1271237 bp
Thymine Count
1274025 bp
Guanine Count
1195087 bp
Cytosine Count
1164560 bp
Genome Length
4904909 bp
Protein-coding Genes
4639 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| accessory colonization factor acfd | C4J69_19680 | Not Available | Positive | 3899147 - 3903709 | 167255.0 |
| leader peptidase pppa | C4J69_19685 | Not Available | Positive | 3903907 - 3904716 | 29467.8 |
| hypothetical protein | C4J69_19690 | Not Available | Positive | 3904782 - 3905192 | 14670.8 |
| type ii secretion system protein gspc | C4J69_19695 | Not Available | Positive | 3905210 - 3906205 | 37351.3 |
| general secretion pathway protein | C4J69_19705 | Not Available | Positive | 3907133 - 3907669 | 20395.7 |
| Trna-phe | Not Available | Not Available | Positive | 3907818 - 3907893 | Not Available |
| hypothetical protein | C4J69_19715 | Not Available | Negative | 3907999 - 3908706 | 24615.5 |
| hypothetical protein | C4J69_19720 | Not Available | Positive | 3908821 - 3909024 | 7585.26 |
| ornithine decarboxylase | C4J69_19725 | Not Available | Positive | 3909104 - 3911239 | 79420.5 |
| nucleoside permease nupg | C4J69_19730 | Not Available | Negative | 3911289 - 3912545 | 46392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





