Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecoli_len:881774 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1271237 bp
Thymine Count
1274025 bp
Guanine Count
1195087 bp
Cytosine Count
1164560 bp
Genome Length
4904909 bp
Protein-coding Genes
4639 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | C4J69_11910 | Not Available | Negative | 2389066 - 2390076 | 35094.6 |
| hydrogenase isoenzymes formation protein hypd | C4J69_11915 | Not Available | Negative | 2390073 - 2391194 | 41365.7 |
| hydrogenase assembly protein hypc | C4J69_11920 | Not Available | Negative | 2391194 - 2391466 | 9732.58 |
| hydrogenase isoenzymes nickel incorporation protein hypb | C4J69_11925 | Not Available | Negative | 2391457 - 2392329 | 31566.8 |
| protein hypa | C4J69_11930 | Not Available | Negative | 2392333 - 2392683 | 13168.9 |
| formate hydrogenlyase regulatory protein hyca | C4J69_11935 | Not Available | Positive | 2392895 - 2393356 | 17627.9 |
| formate hydrogenlyase subunit 2 | C4J69_11940 | Not Available | Positive | 2393481 - 2394092 | 21874.4 |
| formate hydrogenlyase subunit 3 | C4J69_11945 | Not Available | Positive | 2394089 - 2395915 | 64081.1 |
| formate hydrogenlyase subunit 4 | C4J69_11950 | Not Available | Positive | 2395918 - 2396841 | 33031.4 |
| formate hydrogenlyase subunit 5 | C4J69_11955 | Not Available | Positive | 2396859 - 2398568 | 64984.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





