Escherichia coli strain Ecoli_len:881774

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Ecoli_len:881774 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe, with mobility facilitated by the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, and can exist in various forms, including pairs and singles. It has a biotic relationship characterized as free-living, with a single replicon and a double membrane structure. Ecoli_len:881774 is host-associated and has a diverse range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other species spanning multiple taxa, such as mammals, birds, and plants. This broad host range indicates its ecological versatility and adaptability. In terms of health implications, Ecoli_len:881774 is associated with numerous pathogenic effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). Its role in foodborne illnesses and gastrointestinal diseases underscores its significance in public health. The presence of E. coli in various environments, including both animal hosts and as a free-living organism, highlights its ecological importance. It suggests that Ecoli_len:881774 plays a critical role in microbial communities and may influence health outcomes in its hosts, with implications for understanding disease transmission and prevention strategies in both human and veterinary medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Ecoli_len:881774

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Ecoli_len:881774
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Ecoli_len:881774


Gene Summary

Adenine Count

1271237 bp

Thymine Count

1274025 bp

Guanine Count

1195087 bp

Cytosine Count

1164560 bp

Genome Length

4904909 bp

Protein-coding Genes

4639 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative tail assembly chaperoneC4J69_06190Not AvailableNegative1248987 - 12491877612.19
Hypothetical proteinC4J69_06195Not AvailableNegative1249295 - 124965413473.9
Dna modification methylaseC4J69_06200Not AvailableNegative1249635 - 12498989787.9
hypothetical proteinC4J69_06205Not AvailableNegative1249816 - 125009710677.3
trk system potassium uptake protein trkgC4J69_06210Not AvailableNegative1250036 - 125149353946.9
Rz1 proteinC4J69_06215Not AvailableNegative1251690 - 12518756820.68
Hypothetical proteinC4J69_06220Not AvailableNegative1252071 - 125257418487.9
Dna replication proteinC4J69_06225Not AvailableNegative1252546 - 125329228129.8
PrpoC4J69_06230Not AvailableNegative1253299 - 125415632510.8
Cii proteinC4J69_06235Not AvailableNegative1254169 - 125459115743.9

Displaying genes 11 – 20 of 4799 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total