Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecoli_len:881774 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1271237 bp
Thymine Count
1274025 bp
Guanine Count
1195087 bp
Cytosine Count
1164560 bp
Genome Length
4904909 bp
Protein-coding Genes
4639 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cmd domain-containing protein | C4J69_06640 | Not Available | Positive | 1326191 - 1327318 | 42222.1 |
| exoribonuclease 2 | C4J69_06645 | Not Available | Positive | 1327386 - 1329320 | 72494.8 |
| hypothetical protein | C4J69_06650 | Not Available | Negative | 1329398 - 1329502 | 4122.21 |
| cyclic di-gmp phosphodiesterase | C4J69_06655 | Not Available | Positive | 1329556 - 1331541 | 74669.2 |
| hypothetical protein | C4J69_06660 | Not Available | Positive | 1331689 - 1331862 | 6441.71 |
| deor family transcriptional regulator | C4J69_06665 | Not Available | Positive | 1331952 - 1332701 | 27604.2 |
| osmotically-inducible lipoprotein b | C4J69_06670 | Not Available | Positive | 1332970 - 1333188 | 6948.51 |
| stress response translation initiation inhibitor ycih | C4J69_06675 | Not Available | Negative | 1333314 - 1333640 | 11396.9 |
| orotidine-5'-phosphate decarboxylase | C4J69_06680 | Not Available | Negative | 1333640 - 1334377 | 26351.8 |
| lps assembly protein b | C4J69_06685 | Not Available | Negative | 1334571 - 1335740 | 44533.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





