Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose 5-phosphate isomerase kdsd | C4M78_03350 | Not Available | Positive | 657383 - 658369 | 35198.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdsc | C4M78_03355 | Not Available | Positive | 658390 - 658956 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | C4M78_03360 | Not Available | Positive | 658953 - 659528 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | C4M78_03365 | Not Available | Positive | 659497 - 660054 | 20128.1 |
| abc transporter atp-binding protein | C4M78_03370 | Not Available | Positive | 660061 - 660786 | 26802.3 |
| rna polymerase sigma-54 factor | C4M78_03375 | Not Available | Positive | 660834 - 662267 | 53996.8 |
| ribosome hibernation promoting factor | C4M78_03380 | Not Available | Positive | 662290 - 662577 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | C4M78_03385 | Not Available | Positive | 662695 - 663186 | 17960.6 |
| rnase adaptor protein rapz | C4M78_03390 | Not Available | Positive | 663232 - 664086 | 32494.2 |
| phosphocarrier protein npr | C4M78_03395 | Not Available | Positive | 664083 - 664355 | 9810.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





