Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escr/yscr/hrcr family type iii secretion system export apparatus protein | C4M78_01315 | Not Available | Negative | 254273 - 254938 | 24526.4 |
| yscq/hrcq family type iii secretion apparatus protein | C4M78_01320 | Not Available | Negative | 254928 - 255875 | 36193.4 |
| type iii secretion protein | C4M78_01325 | Not Available | Negative | 255875 - 256750 | 33671.8 |
| type iii secretion protein | C4M78_01330 | Not Available | Negative | 256728 - 257195 | 18658.8 |
| flii/yscn family atpase | C4M78_01335 | Not Available | Negative | 257176 - 258495 | 48549.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | C4M78_01340 | Not Available | Negative | 258500 - 260560 | 76391.5 |
| yopn/lcre/inve/mxic type iii secretion system regulator | C4M78_01345 | Not Available | Negative | 260553 - 261686 | 43005.9 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | C4M78_01350 | Not Available | Negative | 261691 - 263394 | 62739.4 |
| arac family transcriptional regulator | C4M78_01355 | Not Available | Negative | 263391 - 264140 | 28286.4 |
| ghot/ortt family toxin | C4M78_01360 | Not Available | Negative | 264486 - 264665 | 6600.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





