Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C4M78_01270 | Not Available | Negative | 248472 - 249206 | 27801.9 |
| hypothetical protein | C4M78_01275 | Not Available | Negative | 249203 - 249535 | 12241.6 |
| type iii secretion system needle complex protein | C4M78_01280 | Not Available | Negative | 249555 - 249794 | 9038.44 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 250415 - 250530 | Not Available |
| prgh/eprh family type iii secretion apparatus protein | C4M78_01285 | Not Available | Negative | 249808 - 250998 | 45384.8 |
| luxr family transcriptional regulator | C4M78_01290 | Not Available | Positive | 251248 - 251748 | 19131.0 |
| invasion protein | C4M78_01295 | Not Available | Positive | 251750 - 252043 | 11161.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | C4M78_01300 | Not Available | Negative | 252104 - 253225 | 43315.3 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | C4M78_01305 | Not Available | Negative | 253234 - 254001 | 28103.7 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C4M78_01310 | Not Available | Negative | 254003 - 254263 | 9430.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





