Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | C4M78_00610 | Not Available | Positive | 107995 - 109116 | 41366.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 108289 - 108404 | Not Available |
| hydrogenase expression/formation protein hype | C4M78_00615 | Not Available | Positive | 109113 - 110123 | 35066.5 |
| formate hydrogenlyase transcriptional activator flha | C4M78_00620 | Not Available | Positive | 110197 - 112275 | 78427.5 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 111066 - 111173 | Not Available |
| transporter | C4M78_00625 | Not Available | Positive | 112281 - 112748 | 15893.3 |
| nitrous oxide-stimulated promoter family protein | C4M78_00630 | Not Available | Negative | 112787 - 113131 | 13535.7 |
| dna mismatch repair protein muts | C4M78_00635 | Not Available | Positive | 113418 - 115979 | 95309.5 |
| serine/threonine protein phosphatase | C4M78_00640 | Not Available | Positive | 116085 - 116741 | 24941.4 |
| hypothetical protein | C4M78_00645 | Not Available | Negative | 116782 - 117018 | 9180.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





