Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C4M78_17835 | Not Available | Positive | 3480728 - 3481831 | 40397.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | C4M78_17840 | Not Available | Positive | 3481920 - 3482390 | 16157.4 |
| n utilization substance protein b | C4M78_17845 | Not Available | Positive | 3482410 - 3482829 | 15689.9 |
| thiamine-monophosphate kinase | C4M78_17850 | Not Available | Positive | 3482907 - 3483884 | 35056.8 |
| phosphatidylglycerophosphatase a | C4M78_17855 | Not Available | Positive | 3483862 - 3484380 | 19419.2 |
| aldo/keto reductase | C4M78_17860 | Not Available | Negative | 3484434 - 3485408 | 36422.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | C4M78_17865 | Not Available | Negative | 3485463 - 3487325 | 67636.9 |
| farnesyl-diphosphate synthase | C4M78_17870 | Not Available | Negative | 3487350 - 3488249 | 32205.6 |
| exodeoxyribonuclease 7 small subunit | C4M78_17875 | Not Available | Negative | 3488249 - 3488491 | 8952.42 |
| trna 4-thiouridine(8) synthase thii | C4M78_17880 | Not Available | Positive | 3488697 - 3490145 | 55004.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





