Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p-like protein yeip | C4M78_17630 | Not Available | Negative | 3443363 - 3443935 | 21533.9 |
| ykgj family cysteine cluster protein | C4M78_17635 | Not Available | Positive | 3444090 - 3444344 | 8954.96 |
| sugar efflux transporter setb | C4M78_17640 | Not Available | Negative | 3444341 - 3445522 | 42678.5 |
| hypothetical protein | C4M78_17645 | Not Available | Positive | 3445714 - 3445995 | 10957.5 |
| hpr family phosphocarrier protein | C4M78_17650 | Not Available | Positive | 3445890 - 3447020 | 39666.2 |
| 1-phosphofructokinase | C4M78_17655 | Not Available | Positive | 3447020 - 3447958 | 33757.6 |
| pts fructose transporter subunit iibc | C4M78_17660 | Not Available | Positive | 3447975 - 3449666 | 57492.6 |
| pseudouridine kinase | C4M78_17665 | Not Available | Positive | 3450090 - 3451031 | 33604.9 |
| pseudouridine-5'-phosphate glycosidase | C4M78_17670 | Not Available | Positive | 3451019 - 3451957 | 32947.8 |
| nupc/nupg family nucleoside cnt transporter | C4M78_17675 | Not Available | Positive | 3452051 - 3453301 | 43434.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





