Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | C4M78_17520 | Not Available | Positive | 3420483 - 3422993 | 88359.5 |
| hypothetical protein | C4M78_17525 | Not Available | Positive | 3422957 - 3423142 | 6617.18 |
| Trna-pro | Not Available | Not Available | Positive | 3423096 - 3423172 | Not Available |
| duf3413 domain-containing protein | C4M78_17535 | Not Available | Negative | 3423247 - 3425007 | 67299.8 |
| hypothetical protein | C4M78_17540 | Not Available | Negative | 3425027 - 3425254 | 8288.95 |
| nucleoid-associated protein | C4M78_17545 | Not Available | Positive | 3425436 - 3426443 | 37825.6 |
| 50s ribosomal protein l25 | C4M78_17550 | Not Available | Negative | 3426582 - 3426866 | 10693.1 |
| atp-dependent helicase | C4M78_17555 | Not Available | Negative | 3426991 - 3428751 | 66521.0 |
| 16s rrna pseudouridine(516) synthase | C4M78_17565 | Not Available | Positive | 3428901 - 3429596 | 25866.8 |
| bcr/cfla family drug resistance efflux transporter | C4M78_17570 | Not Available | Positive | 3429624 - 3430814 | 43355.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





