Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis heme-transporting atpase ccma | C4M78_17470 | Not Available | Positive | 3413114 - 3413737 | 22929.4 |
| heme exporter protein b | C4M78_17475 | Not Available | Positive | 3413734 - 3414396 | 23620.3 |
| heme exporter protein c | C4M78_17480 | Not Available | Positive | 3414438 - 3415175 | 27886.9 |
| heme exporter protein d | C4M78_17485 | Not Available | Positive | 3415172 - 3415381 | 7745.59 |
| cytochrome c-type biogenesis protein ccme | C4M78_17490 | Not Available | Positive | 3415378 - 3415857 | 17699.4 |
| heme lyase ccmf/nrfe family subunit | C4M78_17495 | Not Available | Positive | 3415854 - 3417797 | 71409.6 |
| thiol:disulfide interchange protein | C4M78_17500 | Not Available | Positive | 3417794 - 3418351 | 20810.1 |
| cytochrome c biogenesis protein ccmh | C4M78_17505 | Not Available | Positive | 3418348 - 3419400 | 39091.3 |
| dna-binding response regulator | C4M78_17510 | Not Available | Negative | 3419435 - 3420082 | 23636.5 |
| hypothetical protein | C4M78_17515 | Not Available | Positive | 3420114 - 3420371 | 9917.14 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





