Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate--2-oxoglutarate transaminase | C4M78_00265 | Not Available | Positive | 46400 - 47680 | 45650.4 |
| gaba permease | C4M78_00270 | Not Available | Positive | 47917 - 49317 | 51129.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 48495 - 48625 | Not Available |
| fcd domain-containing protein | C4M78_00275 | Not Available | Positive | 49338 - 50000 | 25019.4 |
| peptidoglycan-binding protein lysm | C4M78_00280 | Not Available | Negative | 50001 - 50450 | 16094.0 |
| yqae/pmp3 family membrane protein | C4M78_00285 | Not Available | Negative | 50534 - 50692 | 5865.57 |
| transcriptional regulator | C4M78_00290 | Not Available | Positive | 50875 - 51174 | 10666.0 |
| rhodanese-like domain-containing protein ygap | C4M78_00295 | Not Available | Positive | 51184 - 51708 | 18672.9 |
| dna-binding protein stpa | C4M78_00300 | Not Available | Negative | 51755 - 52159 | 15375.4 |
| l-alanine exporter alae | C4M78_00305 | Not Available | Positive | 52826 - 53275 | 16950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





