Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (quinone) | C4M78_17420 | Not Available | Positive | 3404569 - 3406215 | 60263.1 |
| ecotin | C4M78_17425 | Not Available | Negative | 3406365 - 3406853 | 18180.0 |
| hypothetical protein | C4M78_17430 | Not Available | Negative | 3406988 - 3407161 | 6598.22 |
| ferredoxin-type protein napf | C4M78_17435 | Not Available | Positive | 3407261 - 3407755 | 18048.3 |
| protein napd | C4M78_17440 | Not Available | Positive | 3407745 - 3408008 | 9469.03 |
| periplasmic nitrate reductase subunit alpha | C4M78_17445 | Not Available | Positive | 3408005 - 3410491 | 93061.0 |
| ferredoxin-type protein napg | C4M78_17450 | Not Available | Positive | 3410498 - 3411193 | 24926.1 |
| ferredoxin-type protein naph | C4M78_17455 | Not Available | Positive | 3411180 - 3412043 | 31875.3 |
| nitrate reductase | C4M78_17460 | Not Available | Positive | 3412040 - 3412489 | 16281.4 |
| cytochrome c-type protein napc | C4M78_17465 | Not Available | Positive | 3412499 - 3413101 | 23101.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





