Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | C4M78_17370 | Not Available | Positive | 3391570 - 3394419 | 106543.0 |
| dna-binding response regulator | C4M78_17375 | Not Available | Negative | 3394505 - 3395155 | 23672.0 |
| phosphotransferase rcsd | C4M78_17380 | Not Available | Negative | 3395172 - 3397844 | 100326.0 |
| hypothetical protein | C4M78_17385 | Not Available | Negative | 3397861 - 3398100 | 9171.34 |
| hypothetical protein | C4M78_17390 | Not Available | Negative | 3398075 - 3398302 | 8754.88 |
| phosphoporin phoe | C4M78_17395 | Not Available | Positive | 3398583 - 3399677 | 40242.1 |
| fad:protein fmn transferase | C4M78_17400 | Not Available | Positive | 3399789 - 3400844 | 38578.0 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | C4M78_17405 | Not Available | Positive | 3400918 - 3401982 | 39234.8 |
| dna oxidative demethylase alkb | C4M78_17410 | Not Available | Positive | 3401982 - 3402632 | 24086.9 |
| microcin j25 efflux abc transporter yoji | C4M78_17415 | Not Available | Positive | 3402708 - 3404351 | 61528.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





