Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | C4M78_17265 | Not Available | Negative | 3359066 - 3359320 | 9293.29 |
| ribonucleotide-diphosphate reductase subunit beta | C4M78_17270 | Not Available | Negative | 3359320 - 3360450 | 43503.6 |
| ribonucleoside-diphosphate reductase subunit alpha | C4M78_17275 | Not Available | Negative | 3360596 - 3362881 | 85722.9 |
| aida-i family autotransporter yfal | C4M78_17285 | Not Available | Positive | 3363577 - 3367335 | 132055.0 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | C4M78_17290 | Not Available | Negative | 3367396 - 3368118 | 26639.1 |
| gntr family transcriptional regulator | C4M78_17295 | Not Available | Negative | 3368196 - 3368894 | 26379.8 |
| mfs transporter | C4M78_17300 | Not Available | Positive | 3369132 - 3370460 | 48990.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | C4M78_17305 | Not Available | Positive | 3370473 - 3371675 | 44320.3 |
| dna gyrase subunit a | C4M78_17310 | Not Available | Positive | 3372026 - 3374653 | 96969.3 |
| duf2138 domain-containing protein | C4M78_17315 | Not Available | Positive | 3374802 - 3376490 | 62669.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





