Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | C4M78_17165 | Not Available | Negative | 3337857 - 3338825 | 36311.4 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | C4M78_17170 | Not Available | Negative | 3338829 - 3339968 | 41571.2 |
| histidine phosphatase family protein | C4M78_17175 | Not Available | Positive | 3340276 - 3340878 | 22291.8 |
| nucleoside triphosphatase nudi | C4M78_17180 | Not Available | Negative | 3340917 - 3341342 | 16371.6 |
| hypothetical protein | C4M78_17185 | Not Available | Positive | 3341620 - 3342162 | 18578.7 |
| competence/damage-inducible protein a | C4M78_17190 | Not Available | Positive | 3342262 - 3343464 | 44228.2 |
| iclr family transcriptional regulator | C4M78_17195 | Not Available | Positive | 3343684 - 3344466 | 28905.8 |
| l-rhamnonate dehydratase | C4M78_17200 | Not Available | Positive | 3344481 - 3345686 | 44240.0 |
| mfs transporter | C4M78_17205 | Not Available | Positive | 3345743 - 3347032 | 46167.2 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | C4M78_17210 | Not Available | Positive | 3347050 - 3347853 | 28860.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





