Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent alcohol dehydrogenase | C4M78_16550 | Not Available | Positive | 3215312 - 3216361 | 38005.6 |
| hypothetical protein | C4M78_16555 | Not Available | Positive | 3216604 - 3217419 | 31812.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 3217762 - 3217842 | Not Available |
| hypothetical protein | C4M78_16560 | Not Available | Positive | 3217832 - 3218077 | 8956.06 |
| hypothetical protein | C4M78_16565 | Not Available | Negative | 3218094 - 3218765 | 24821.9 |
| duf1471 domain-containing protein | C4M78_16570 | Not Available | Positive | 3218912 - 3219187 | 9871.9 |
| propionate catabolism operon regulatory protein prpr | C4M78_16575 | Not Available | Negative | 3219285 - 3220871 | 58635.9 |
| methylisocitrate lyase | C4M78_16580 | Not Available | Positive | 3221110 - 3222000 | 32136.5 |
| 2-methylcitrate synthase | C4M78_16585 | Not Available | Positive | 3222045 - 3223214 | 43136.6 |
| 2-methylcitrate dehydratase | C4M78_16590 | Not Available | Positive | 3223248 - 3224699 | 54012.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





