Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-di-gmp phosphodiesterase | C4M78_16500 | Not Available | Positive | 3205125 - 3206213 | 40740.3 |
| lysr family transcriptional regulator | C4M78_16505 | Not Available | Negative | 3206255 - 3207187 | 34742.9 |
| duf1097 domain-containing protein | C4M78_16510 | Not Available | Negative | 3207279 - 3207776 | 17152.8 |
| hypothetical protein | C4M78_16515 | Not Available | Positive | 3207853 - 3208086 | 9006.03 |
| hypothetical protein | C4M78_16520 | Not Available | Positive | 3208034 - 3208639 | 21702.4 |
| duf2877 domain-containing protein | C4M78_16525 | Not Available | Positive | 3208679 - 3209542 | 32188.5 |
| acyl-coa synthetase fdra | C4M78_16530 | Not Available | Positive | 3209532 - 3211079 | 55547.2 |
| duf1116 domain-containing protein | C4M78_16535 | Not Available | Positive | 3211079 - 3212497 | 50395.0 |
| carbamate kinase | C4M78_16540 | Not Available | Positive | 3212593 - 3213543 | 34043.0 |
| deaminase | C4M78_16545 | Not Available | Positive | 3213553 - 3214935 | 50536.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





