Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4M78_16280 | Not Available | Positive | 3161767 - 3163599 | 66917.3 |
| hypothetical protein | C4M78_16285 | Not Available | Positive | 3163634 - 3164347 | 25796.1 |
| integrase | C4M78_16290 | Not Available | Negative | 3164429 - 3165763 | 51062.6 |
| hypothetical protein | C4M78_16295 | Not Available | Positive | 3166061 - 3166246 | 6718.26 |
| hypothetical protein | C4M78_16300 | Not Available | Positive | 3166461 - 3167075 | 22968.1 |
| ykgj family cysteine cluster protein | C4M78_16305 | Not Available | Negative | 3167325 - 3167654 | 11799.1 |
| hypothetical protein | C4M78_16310 | Not Available | Negative | 3167967 - 3168677 | 26650.7 |
| fimbria adhesin ecpd | C4M78_16315 | Not Available | Negative | 3168646 - 3170289 | 59937.1 |
| fimbrial biogenesis outer membrane usher protein | C4M78_16320 | Not Available | Negative | 3170279 - 3172804 | 91297.7 |
| fimbrial chaperone ecpb | C4M78_16325 | Not Available | Negative | 3172830 - 3173498 | 24484.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





