Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin dinj | C4M78_16130 | Not Available | Negative | 3137611 - 3137871 | 9334.27 |
| peptidoglycan endopeptidase | C4M78_16135 | Not Available | Positive | 3138081 - 3138830 | 28767.3 |
| flagellar type iii secretion system protein flha | C4M78_16140 | Not Available | Negative | 3138928 - 3140667 | 63150.0 |
| putative lateral flagellar export/assembly protein lafu | C4M78_16145 | Not Available | Positive | 3140627 - 3141397 | 28373.2 |
| dna polymerase iv | C4M78_16150 | Not Available | Positive | 3141468 - 3142523 | 39544.3 |
| type ii toxin-antitoxin system yafn family antitoxin | C4M78_16155 | Not Available | Positive | 3142575 - 3142868 | 11236.4 |
| type ii toxin-antitoxin system yafo family toxin | C4M78_16160 | Not Available | Positive | 3142871 - 3143269 | 15458.7 |
| gnat family n-acetyltransferase | C4M78_16165 | Not Available | Positive | 3143279 - 3143731 | 17485.1 |
| rna ligase rtcb family protein | C4M78_16170 | Not Available | Positive | 3143910 - 3145061 | 42067.3 |
| peptide chain release factor h | C4M78_16175 | Not Available | Positive | 3145058 - 3145672 | 22942.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





